- Genome size estimation of an endoparasitoid wasp, Cotesia plutellae, using quantitative real-time polymerase chain reaction
- 作者: Park, Bokri and Kim, Yonggyun
- literature id: 37202
- catalog nub: TPL_PARKnn2012GSEOA34903530
- 文献库: Taxapad收录文献
- type: article
- publication name: Journal of Asia Pacific Entomology
- publish date: 2012-09-01
- pages: 349-353
- volume: 15
- issue: 3
- 创建时间: 2021-03-02 15:00:32
- create by: zxmlmq (admin)
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comment:
none Enter An endoparasitoid wasp, Cotesia plutellae, is a natural enemy against the diamondback moth, Plutella xylostella, which is the most destructive insect pest of cruciferous crop plants. The wasp genome contains genetic information of several parasitic factors, such as its symbiotic virus (C. plutellae bracovirus), venom, teratocyte as well as the parasitoid itself. These parasitic factors interfere with physiological processes of the immature stages of P. xylostella and need to be analyzed concerning their genetic components. A full genome sequence of C. plutellae would be highly informative to determine functional genes associated with these parasitic factors. Before a full genome sequence analysis of C. plutellae can be undertaken, an estimate of genome size is needed. In this study, we used a strategy using a quantitative real-time polymerase chain reaction (qPCR) to measure the wasp genome size. qPCR determined the number of a single copy gene hexokinase in a total mass of genomic DNA. The resulting molecular weight of the DNA sample was used to calculate the genome size in base pair (bp). This estimation approach indicated a genome size of C. plutellae of 186.06 [plus or minus] 1.21 Mb. [copyright] Korean Society of Applied Entomology, Taiwan Entomological Society and Malaysian Plant Protection Society, 2012. Published by Elsevier B.V. All rights reserved. Sep 2012 noneEmail20150305 (hosanna@andong.ac.kr)
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